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  1. Cenote-Taker3 Cenote-Taker3 Public

    Discover and annotate the virome

    Python 33 1

  2. cmmr/EsViritu cmmr/EsViritu Public

    Read mapping pipeline for detection and measurement of virus pathogens from metagenomic or clinical data

    Shell 22 3

  3. cmmr/Marker-MAGu cmmr/Marker-MAGu Public

    Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes

    Python 9

  4. Cenote-Taker2 Cenote-Taker2 Public

    Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead)

    Shell 55 7

  5. DNA_methylase_finder DNA_methylase_finder Public

    Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes

    Shell 9

  6. influenza_a_serotype influenza_a_serotype Public template

    assign sequencing reads to influenza A serotypes

    Python 3 1