Skip to content

Issues: evoldoers/biomake

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

25 Open 36 Closed
25 Open 36 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

What are pair and single files?
#88 opened Jul 20, 2024 by MichaelHinrichs
Recent SWI Prolog breaks DCG test?
#86 opened Sep 17, 2023 by ihh
Cannot specify multiple targets using a variable
#82 opened Oct 8, 2020 by rulatir
Silently unsupported GNU Make feature: Rules with Grouped Targets
#81 opened Oct 7, 2020 by rulatir
If a deep dependency fails with "no way to make", only a direct dependency of the main goal is mentioned
#80 opened Jun 24, 2020 by rulatir
Target-specific variables unsupported or broken GNU make compatibility
#79 opened Jun 4, 2020 by rulatir
3
Multiple outputs - correct pattern
#78 opened Feb 19, 2020 by samwalrus
1
Build failure should result in the deletion of unbuilt targets Bug GNU make compatibility
#77 opened Dec 18, 2019 by ihh
Refactor the README into readthedocs
#71 opened Feb 24, 2019 by cmungall
@cmungall
Biomake macro for MD5 hash of a file Feature request
#68 opened Oct 10, 2018 by ihh
More Prolog recipes for extending rules Documentation
#67 opened Oct 1, 2018 by ihh
@ihh
Add biomake to bioconda
#65 opened Aug 3, 2018 by cmungall
@cmungall
Welcome message should draw version number from pack.pl Documentation
#63 opened Jun 29, 2018 by cmungall
@cmungall
Retain the job number Feature request
#59 opened Jan 19, 2018 by sjackman
2
SLURM: Option to join stdout and stderr Feature request
#58 opened Jan 19, 2018 by sjackman
3
Pattern rules with multiple targets GNU make compatibility
#57 opened Jan 18, 2018 by sjackman
Implement multiple rules per target Feature request GNU make compatibility
#56 opened Jan 18, 2018 by sjackman
Implement static pattern rules Feature request GNU make compatibility
#55 opened Jan 18, 2018 by sjackman
Observe the SHELL environment variable GNU make compatibility
#54 opened Jan 18, 2018 by sjackman
4
biomake -Q slurm prints an error when the subdirectory does not exist Bug
#53 opened Jan 18, 2018 by sjackman
14
Prefer more specific rules over more general ones GNU make compatibility
#51 opened Jan 16, 2018 by sjackman
Use built-in hash predicates of library(crypto) for portability Prolog portability
#45 opened Sep 25, 2017 by triska
1
Implement order-only prerequisites GNU make compatibility
#41 opened Mar 15, 2017 by ihh
Cyclic dependency makes biomake sad Bug GNU make compatibility
#40 opened Mar 15, 2017 by ihh
plugin idea: automatic metadata annotation Feature request
#15 opened Dec 10, 2016 by cmungall
@cmungall
5
ProTip! Type g i on any issue or pull request to go back to the issue listing page.